10 best accounting software for Amazon sellers 2021

10 best accounting software for Amazon sellers 2021

Amazon New Sellers

We all know it is a strenuous task to keep track of expenditures and income. Amazon provides you with a lot of information, at the same time, it is still very tedious, time-consuming, and confusing to understand the important data in the seller central. Therefore, if you want to stay ahead of the Amazon sales competition, you need Amazon accounting software to help you. Amazon accounting software can efficiently and accurately check the most important indicators and provide you with a comprehensive business perspective.

What are the features of Amazon accounting software?

Comprehensive accounting software will offer you several features and plans. Generally speaking, its functions can be divided into the following categories.

Manage product cost

Accounting software allows you to manage the cost of goods sold, in this way, so that you can discover revenues, margins, and profitability. 

Manage inventory 

Accounting software can help you to manage your Fulfillment by Amazon (FBA) inventory levels. It can monitor which items have been sent to, delivered from, or are currently being stored at Amazon’s fulfillment centers. In addition, it can automatically calculate your inventory cost and In-stock value.


It is necessary for accounting software to track revenues and expenses. It should calculate and track all your fees, including per-item fees, referral fees, variable closing fees, and shipping fees. In addition, it should generate and update the accounts payable, accounts receivable, and general ledger. Match the balances in your accounting records with your bank accounts.

Create invoices

Of course, amazon accounting software has the feature that creates invoices for goods sold and sets up recurring billing via credit card payments.

Manage sales tax

Accounting software helps you automatically prepare and fill the state tax returns. Besides, it contains a database of all applicable sales tax rates, updated to ensure accuracy, to ensure customers are charged appropriately.

What are the benefits of using Amazon accounting software?

Better know your profitability

It is difficult for you to know your real profit in the Amazon seller central, you have to take a lot of time to calculate it. Accounting software can give you access to know what your income and expenses are at any given moment. Hence you can know your product profitability and better make decisions to level up your business.

Control your finances

Accounting software continuously tracks revenues and expenses for you, as a result, you are easy to know the finances of your business. Once you find there are unnecessary costs, you can reduce them to increase your profit.

Better manage your product cost

Accounting software can determine your COGS by syncing with your Amazon account and downloading all relevant sales data, which eliminates the need to manually match sales to costs. Of course, if necessary you can change and custom the product cost by yourself.

Synchronization manage your inventory

With the help of accounting software, you can know your inventory level clearly. To clarify, you have all idea about which items have been sent to, delivered from, or are currently being stored at Amazon’s fulfillment centers.

Keep Business and Personal Finances Separate

If you are an individual entrepreneur, it often happens to mix personal finance with business finance. Hence if you use accounting software, you will find it will be able to keep data on your business income and expenses separate from your personal finances.

In addition, keeping two separate accounts will reduce your legal liability and better manage your taxes and business bills.

10 best accounting software for Amazon sellers 2021

1. QuickBooks Online

Provides powerful reporting capabilities.

Amazon accounting software-quickboos online

QuickBooks Online has more than 7 million users worldwide and a market share of more than 80%. And I have to say it is accounting software that is suitable for Amazon sellers.

Key feature:

  • Easily manage your inventory

QuickBooks Online provides an option for sellers to create an inventory list. Firstly, connect to the amazon account and then automatically sync the inventory. So that sellers can know which products to restock and which to discontinue.

  • Track profit clearly

In addition to inventory data, QuickBooks Online can also help you synchronize the sales data. Hence you can easily know exactly how much money your business makes with clear reports and dashboards.

Also, sellers can generate multiple detailed reports on profit and loss, inventory costs, shipping, and overhead quickly and seamlessly with the QuickBooks Online reporting feature. It provides you a good place to put all your detailed financials in one place.

  • Track sales tax

QuickBooks Online can automatically calculate taxes on your invoices. It is a great feature. As we all know, the sales tax fluctuates from state to state, and even municipality to municipality in some instances, it is difficult and time-consuming if you do it manually by yourself.

  • Receipt capture

All plans can support you take snap photos of receipts on the go and upload or email receipts to QuickBooks in seconds. Their software will match your expenses or create new expenses for you.

  • Maximize tax deductions

Share your books with your CPA or export important documents when it’s tax season. The software allows you to easily organize income and expense into tax categories.


QuickBooks Online pricing

2. Xero

Suitable for novice accountants.

Amazon accounting software-Xero

Founded in 2006, Xero leads the cloud accounting markets in New Zealand, Australia, and the United Kingdom.  Xero is developing rapidly, now it has over 2 million subscribers globally. Xero is known for its ease of use. You can see your cash flow in real-time with online billing, banking, and accounting.

Key feature:

Amazon accounting software- Xero feature lists


Amazon accounting software- Xero pricing

3. Captain BI

Best accounting software for small to mid-sized Amazon sellers.

Amazon accounting software-Captain BI

Captain BI aims to solve the problem of collecting and analyzing cumbersome and time-consuming seller data, and to provide Amazon sellers with the most professional financial advice. It provides Amazon profit analytics through increased control of your FBA finance data.

key feature:

  • Provide detailed profit and loss reports

Captain BI presents revenue data broken down by sales, refunds, reimbursements, and the cost of promotions in real-time. Besides, you can check the profit and loss report by individual items and specific date range.

  • Check data from multi-accounts

You can see, Captain BI allows the user to connect to multiple seller accounts. You can see all your stores’ performance, even you can compare the difference with the different stores.

  • Manage inventory

The software can automatically sync your inventory, and remind you when you should restock, and which products have to be attentive to because of the high storage fees.

  • Manage external fees

Besides, Captain BI provides you a place to manage your external fees. You can customize the taxes, VAT fees, social media costs, and paid ads fees.


Free for 90 days.

4. A2X

Best software for automatically calculate deposits.

Amazon accounting software-A2X

A2X software can automatically fetch Amazon’s settlement information and generates a summary. It is mainly used with Xero, Quickbooks, and Shopify and checks for settlements every day.

Key feature:

  • The accrual method of accounting

A2X organizes your books via the accrual method of accounting. That is to say, accrual accounting focuses on income and expenses, not cash realization accounting. So that, A2X can give you a more intuitive understanding of your financial situation to help level up your Amazon business.

  • Easily track your Amazon sales margin

A2X matches your cost of goods sold to your Amazon sales to make it easy to track your gross margin.

  • Calculate your FBA inventory value

A2X automatically takes an FBA inventory stocktake each month and calculates the value of FBA stock for your balance sheet.

  • Amazon Pay accounting and reconciliation

Have confidence that you can reconcile your Amazon Pay payouts to the originating sales transactions with Amazon Pay reconciliation accounting.


Accounting software-A2X pricing

5. TaxJar

Great software for sales tax calculation.

Accounting software- TaxJar

Although most Amazon accounting programs include sales tax modules, these features only calculate the sales tax payable based on the information entered by the user. They do not manage sales tax compliance or submit sales tax returns. As a result, TaxJar is a great choice for you to process the tax calculation. It can help you avoid the trouble of managing more than 10,000 sales tax jurisdictions in the United States, saving you countless hours and money.

Key feature:

  • Precise product classification 

TaxJar helps you assign the right product tax code to each of your products as the starting point for sales tax calculation.

  • The calculation is refined to all FBA states

TaxJar will tell you what you might owe in each of the states with an Amazon warehouse. These are the states you likely owe sales tax in.

  • Automated sales tax filing

For an additional fee per filing per state, their AutoFile feature will file your state sales tax return for you every month, quarter, or year. Never bother with sales tax again.

  • Continuous tax law monitoring

TacJar’s in-house team of sales tax experts are constantly reviewing the ever-changing tax codes at the state and local level.

  • County and city granularity

No more manually breaking down sales tax collected by counties, cities, or districts. For states requiring it, TaxJar’s reports will break this detail down for you. TaxJar is the only software that does this.


30-day free trial

Starter   Starting at $19/mo, for reporting and filing requirements.

Professional   Starting at $99/mo, for sales tax automation and reporting needs.

6. TaxCloud

Affordable sales tax compliance service.

accounting software-TaxCloud

TaxCloud is a sales tax management and compliance software for online retailers. TaxCloud has 25-member states so that TaxCloud can offer industry-leading tax data, automated filing options, the lowest prices, and the best value for your business’s transactions in the USA.

Key feature:

  • Working with 25 member states 

TaxCloud working closely with 25 member states, so that they can offer a lower price for the industry. In addition, TaxCloud provides automated compliance for free in the member states. To receive compliance in non-member states, the solution starts at $9/month.

  • Automatically calculates and collect sales tax

The software automatically calculates and collects sales tax from your Amazon Marketplace. And they determine the applicable sales tax rate based on product and service taxability.

  • Automatically file and remit your sales tax

And then, they can automatically file and remit your sales tax to TaxCloud’s member states. Save a lot of time for you, there is no need for you to worry about it.


$10 Base price covers the cost access and maintenance of historical data and reports

And there are more plans for your to choose from based on your needs.

7. GoDaddy Online Bookkeeping

Best entry-level accounting software for Amazon sellers.

Go Daddy online bookkeeping

GoDaddy Online Bookkeeping provides a simple way for small sellers with no accounting background to manage finances.

Key feature:

  • Easy to use

It is exceedingly simple to use and doesn’t require any prior accounting knowledge, unlike Quickbooks or Xero.

  • Integrate with all accounts

GoDaddy Online Bookkeeping has direct integration with Amazon, eBay, Etsy, PayPal, and other eCommerce and online retailer storefronts. In this way, it is a great match for people who are reselling and using eCommerce.

  • Track your business

GoDaddy Online Bookkeeping creates invoices, monitors expenses, accepts payments from your mobile device, and provides current year business reports.

  • Automatic import feature

GoDaddy Bookkeeping has an automatic import feature for Amazon, a pre-populated Schedule C worksheet, and absolutely no set-up required.


There is sometimes a slight lag while reflecting bank balance;

It is not a good choice for huge businesses because it has no inventory integration.


GoDaddy has one of the lowest starting prices out there ($4.99/month for their basic plan).

Go Daddy pricing

8. Wave accounting

Best free accounting software for small businesses.

wave accounting

Wave can help small businesses track their expenses, balance books, invoices, and get paid. The accounting software is free, however, services such as credit card payment processing will cost extra.

Key feature:

  • Track your income and expenses

Wave automatically tracks your income and expenses, if you just getting started out your business, Wave has been the software of choice.

  • Create professional invoices for free

With the help of Wave, you can create and send invoices for products sold on Amazon and receive payments from customers. Besides, you can import receipts of your business expenses, and produce accurate financial reports.

  • Make tax time a breeze

Wave’s smart dashboard organizes your income, expenses, payments, and invoices.  When everything is neatly where it belongs, tax time is simple.


The software is 100% free, has no trials, no limitations, and no hidden fees. 

9. Denali Business

The ideal choice for sellers with the multi-location inventory.

Denali Business

Denali Business offers a variety of features for Amazon sellers, including robust accounts receivable functionality.

Key feature:

  • Track all customer transactions

Denali Business allows Amazon sellers to track all customer transactions through its integration with Amazon. Also, they allow sellers to flag specific customers for various issues for future tracking.

  • Reconcile transactions automatically

By connecting to the retailer’s bank to monitor and manage transactions, it is possible for sellers to reconcile transactions automatically. In addition, the software can track multiple bank accounts and even set recurring transactions with its built-in ability.

  • Create budgets that extend as many as five full years

What-If Analysis tool support sellers to create budgets that extend as many as five full years. To clarify, it is helpful for amazon sellers who are considering making big changes.


Pricing information is only available by asking for a quote from Cougar Mountain Software.

10. AccountingSuite

Comprehensive accounting platform for all Amazon sellers.


AccountingSuite is a comprehensive accounting platform that includes all the core accounting features any Amazon seller would need.

Key feature:

  • Track all transactions

After connecting to the Amazon store, all the retailer’s transactions appear in the Cloud Commerce dashboard, which is automatically updated every 12 hours. 

  • Track inventory

sellers can easily manage and track inventory using either the product category or location. Also, the software allows sellers to track stock by cost and see the profit margin on each item. In addition, the software support syncs the inventory from other platforms.

  • Powerful standard reports

AccountingSuite provides many standard reports to visualize sales revenue or loss. So that sellers can better understand their business and know what to do next.


accounting software-AccountingSuite pricing

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